IL_7QI4_095
3D structure
- PDB id
- 7QI4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome at 2.2 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- CCG*CAUG
- Length
- 7 nucleotides
- Bulged bases
- 7QI4|1|AA|C|1484, 7QI4|1|AA|U|1568
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QI4_095 not in the Motif Atlas
- Geometric match to IL_4V88_463
- Geometric discrepancy: 0.0694
- The information below is about IL_4V88_463
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61438.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
7QI4|1|AA|C|1483
7QI4|1|AA|C|1484
7QI4|1|AA|G|1485
*
7QI4|1|AA|C|1566
7QI4|1|AA|A|1567
7QI4|1|AA|U|1568
7QI4|1|AA|G|1569
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain 8
- 39S ribosomal protein L40, mitochondrial
- Chain A3
- Aurora kinase A-interacting protein
- Chain AD
- 28S ribosomal protein S5, mitochondrial
- Chain Ax
- Transfer RNA; tRNA
- Chain Az
- mRNA
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