IL_7QI5_061

3D structure

PDB id

7QI5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA, A/A-, P/P- and E/E-tRNAs at 2.63 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.63 Å

Loop

Sequence

CAU*AG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QI5_061 not in the Motif Atlas

Geometric match to IL_4LFB_004

Geometric discrepancy: 0.0743

The information below is about IL_4LFB_004

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_41261.1

Basepair signature

cWW-tHS-cWW

Number of instances in this motif group

44

Unit IDs

7QI5|1|AA|C|694
7QI5|1|AA|A|695
7QI5|1|AA|U|696
*
7QI5|1|AA|A|819
7QI5|1|AA|G|820

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AU

28S ribosomal protein S26, mitochondrial