IL_7QI5_064
3D structure
- PDB id
- 7QI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with mRNA, A/A-, P/P- and E/E-tRNAs at 2.63 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- CAUCAA*UCAAAACG
- Length
- 14 nucleotides
- Bulged bases
- 7QI5|1|AA|U|758, 7QI5|1|AA|A|782
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QI5_064 not in the Motif Atlas
- Geometric match to IL_4LFB_011
- Geometric discrepancy: 0.1154
- The information below is about IL_4LFB_011
- Detailed Annotation
- Kink-turn with non-sequential stacking
- Broad Annotation
- Kink-turn
- Motif group
- IL_46174.6
- Basepair signature
- cWW-cSS-tSS-tSH-L-cWW-tHW-cWW
- Number of instances in this motif group
- 7
Unit IDs
7QI5|1|AA|C|756
7QI5|1|AA|A|757
7QI5|1|AA|U|758
7QI5|1|AA|C|759
7QI5|1|AA|A|760
7QI5|1|AA|A|761
*
7QI5|1|AA|U|779
7QI5|1|AA|C|780
7QI5|1|AA|A|781
7QI5|1|AA|A|782
7QI5|1|AA|A|783
7QI5|1|AA|A|784
7QI5|1|AA|C|785
7QI5|1|AA|G|786
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain A3
- Aurora kinase A-interacting protein
- Chain AJ
- 28S ribosomal protein S12, mitochondrial
- Chain AL
- 28S ribosomal protein S15, mitochondrial
- Chain AN
- 28S ribosomal protein S17, mitochondrial
Coloring options: