IL_7QIW_011
3D structure
- PDB id
- 7QIW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant ribosome. 60S ribosomal subunit.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- GAC*GACCC
- Length
- 8 nucleotides
- Bulged bases
- 7QIW|1|2|C|236
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QIW_011 not in the Motif Atlas
- Geometric match to IL_7ENI_001
- Geometric discrepancy: 0.2815
- The information below is about IL_7ENI_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_70784.1
- Basepair signature
- cWW-cWW-cSH-cWW-L
- Number of instances in this motif group
- 7
Unit IDs
7QIW|1|2|G|174
7QIW|1|2|A|175
7QIW|1|2|C|176
*
7QIW|1|2|G|234
7QIW|1|2|A|235
7QIW|1|2|C|236
7QIW|1|2|C|237
7QIW|1|2|C|238
Current chains
- Chain 2
- 25S rRNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain N
- 60S ribosomal protein L13
- Chain j
- Similar to 60S ribosomal protein L35
- Chain l
- Ribosomal protein L37
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