IL_7QIW_052

3D structure

PDB id

7QIW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Specific features and methylation sites of a plant ribosome. 60S ribosomal subunit.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

AU(PSU)(PSU)(PSU)UG*C(A2M)GAACU

Length

14 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QIW|1|2|A|1131
7QIW|1|2|U|1132
7QIW|1|2|PSU|1133
7QIW|1|2|PSU|1134
7QIW|1|2|PSU|1135
7QIW|1|2|U|1136
7QIW|1|2|G|1137
*
7QIW|1|2|C|1143
7QIW|1|2|A2M|1144
7QIW|1|2|G|1145
7QIW|1|2|A|1146
7QIW|1|2|A|1147
7QIW|1|2|C|1148
7QIW|1|2|U|1149

Current chains

Chain 2

25S rRNA

Nearby chains

Chain 5

5S ribosomal RNA; 5S rRNA

Chain I

Thaliana 60S ribosomal protein L7

Chain L

60S ribosomal protein L10

Chain d

60S ribosomal protein L29