IL_7QIW_125

3D structure

PDB id

7QIW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Specific features and methylation sites of a plant ribosome. 60S ribosomal subunit.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GGC(PSU)UG*UGA(PSU)CC

Length

12 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QIW|1|2|G|2827
7QIW|1|2|G|2828
7QIW|1|2|C|2829
7QIW|1|2|PSU|2830
7QIW|1|2|U|2831
7QIW|1|2|G|2832
*
7QIW|1|2|U|2866
7QIW|1|2|G|2867
7QIW|1|2|A|2868
7QIW|1|2|PSU|2869
7QIW|1|2|C|2870
7QIW|1|2|C|2871

Current chains

Chain 2

25S rRNA

Nearby chains

Chain L

60S ribosomal protein L10