IL_7QIW_133
3D structure
- PDB id
- 7QIW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant ribosome. 60S ribosomal subunit.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- UUG*CCA(A2M)G
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QIW_133 not in the Motif Atlas
- Geometric match to IL_3DD2_004
- Geometric discrepancy: 0.3673
- The information below is about IL_3DD2_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09353.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7QIW|1|2|U|2895
7QIW|1|2|U|2896
7QIW|1|2|G|2897
*
7QIW|1|2|C|2912
7QIW|1|2|C|2913
7QIW|1|2|A|2914
7QIW|1|2|A2M|2915
7QIW|1|2|G|2916
Current chains
- Chain 2
- 25S rRNA
Nearby chains
- Chain K
- 60S ribosomal protein uL6
- Chain Q
- 60S ribosomal protein uL13
- Chain X
- 60S ribosomal protein uL14
- Chain o
- Ubiquitin-like domain-containing protein
Coloring options: