IL_7QIW_170
3D structure
- PDB id
- 7QIW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant ribosome. 60S ribosomal subunit.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- AUG*CC(OMU)
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QIW_170 not in the Motif Atlas
- Homologous match to IL_8C3A_023
- Geometric discrepancy: 0.1664
- The information below is about IL_8C3A_023
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
7QIW|1|2|A|679
7QIW|1|2|U|680
7QIW|1|2|G|681
*
7QIW|1|2|C|802
7QIW|1|2|C|803
7QIW|1|2|OMU|804
Current chains
- Chain 2
- 25S rRNA
Nearby chains
- Chain F
- Ribos_L4_asso_C domain-containing protein
- Chain N
- 60S ribosomal protein L13
- Chain S
- Ribosomal_L18e/L15P domain-containing protein
- Chain c
- Putative 60S ribosomal protein L27a-3-like
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