IL_7QIZ_004
3D structure
- PDB id
- 7QIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- CC*GAG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QIZ_004 not in the Motif Atlas
- Homologous match to IL_8C3A_004
- Geometric discrepancy: 0.1304
- The information below is about IL_8C3A_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05035.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 38
Unit IDs
7QIZ|1|2|C|25
7QIZ|1|2|C|26
*
7QIZ|1|2|G|54
7QIZ|1|2|A|55
7QIZ|1|2|G|56
Current chains
- Chain 2
- 25S rRNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain N
- 60S ribosomal protein L13
- Chain P
- Ribosomal protein L15
- Chain j
- Similar to 60S ribosomal protein L35
- Chain l
- Ribosomal protein L37
Coloring options: