IL_7QIZ_028

3D structure

PDB id

7QIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Specific features and methylation sites of a plant 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

CAACG*CGUAAG

Length

11 nucleotides

Bulged bases

7QIZ|1|2|U|710, 7QIZ|1|2|A|711

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QIZ|1|2|C|691
7QIZ|1|2|A|692
7QIZ|1|2|A|693
7QIZ|1|2|C|694
7QIZ|1|2|G|695
*
7QIZ|1|2|C|708
7QIZ|1|2|G|709
7QIZ|1|2|U|710
7QIZ|1|2|A|711
7QIZ|1|2|A|712
7QIZ|1|2|G|713

Current chains

Chain 2

25S rRNA

Nearby chains

Chain F

Ribos_L4_asso_C domain-containing protein

Chain N

60S ribosomal protein L13

Chain P

Ribosomal protein L15

Chain c

Ribosomal_L18e/L15P domain-containing protein