IL_7QIZ_032

3D structure

PDB id

7QIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Specific features and methylation sites of a plant 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

CUUGAU*AGAAGG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QIZ|1|2|C|767
7QIZ|1|2|U|768
7QIZ|1|2|U|769
7QIZ|1|2|G|770
7QIZ|1|2|A|771
7QIZ|1|2|U|772
*
7QIZ|1|2|A|779
7QIZ|1|2|G|780
7QIZ|1|2|A|781
7QIZ|1|2|A|782
7QIZ|1|2|G|783
7QIZ|1|2|G|784

Current chains

Chain 2

25S rRNA

Nearby chains

Chain N

60S ribosomal protein L13

Chain c

Ribosomal_L18e/L15P domain-containing protein

Chain d

60S ribosomal protein L29

Chain p

60S ribosomal protein eL42