IL_7QIZ_042

3D structure

PDB id

7QIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Specific features and methylation sites of a plant 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

CGCGUGCG*CAAG

Length

12 nucleotides

Bulged bases

7QIZ|1|2|U|991, 7QIZ|1|2|A|1114

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QIZ|1|2|C|987
7QIZ|1|2|G|988
7QIZ|1|2|C|989
7QIZ|1|2|G|990
7QIZ|1|2|U|991
7QIZ|1|2|G|992
7QIZ|1|2|C|993
7QIZ|1|2|G|994
*
7QIZ|1|2|C|1112
7QIZ|1|2|A|1113
7QIZ|1|2|A|1114
7QIZ|1|2|G|1115

Current chains

Chain 2

25S rRNA

Nearby chains

Chain I

Thaliana 60S ribosomal protein L7

Chain S

Ribosomal_L18e/L15P domain-containing protein

Chain V

60S ribosomal protein eL21

Chain d

60S ribosomal protein L29