IL_7QIZ_052

3D structure

PDB id

7QIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Specific features and methylation sites of a plant 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

AU(PSU)(PSU)(PSU)UG*C(A2M)GAACU

Length

14 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QIZ|1|2|A|1131
7QIZ|1|2|U|1132
7QIZ|1|2|PSU|1133
7QIZ|1|2|PSU|1134
7QIZ|1|2|PSU|1135
7QIZ|1|2|U|1136
7QIZ|1|2|G|1137
*
7QIZ|1|2|C|1143
7QIZ|1|2|A2M|1144
7QIZ|1|2|G|1145
7QIZ|1|2|A|1146
7QIZ|1|2|A|1147
7QIZ|1|2|C|1148
7QIZ|1|2|U|1149

Current chains

Chain 2

25S rRNA

Nearby chains

Chain 5

5S ribosomal RNA; 5S rRNA

Chain I

Thaliana 60S ribosomal protein L7

Chain L

60S ribosomal protein L10

Chain d

60S ribosomal protein L29