IL_7QIZ_062

3D structure

PDB id

7QIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Specific features and methylation sites of a plant 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

CUGCAAAAC*GCGGAG

Length

15 nucleotides

Bulged bases

7QIZ|1|2|C|1402

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QIZ|1|2|C|1399
7QIZ|1|2|U|1400
7QIZ|1|2|G|1401
7QIZ|1|2|C|1402
7QIZ|1|2|A|1403
7QIZ|1|2|A|1404
7QIZ|1|2|A|1405
7QIZ|1|2|A|1406
7QIZ|1|2|C|1407
*
7QIZ|1|2|G|1425
7QIZ|1|2|C|1426
7QIZ|1|2|G|1427
7QIZ|1|2|G|1428
7QIZ|1|2|A|1429
7QIZ|1|2|G|1430

Current chains

Chain 2

25S rRNA

Nearby chains

Chain 8

5.8S ribosomal RNA; 5.8S rRNA

Chain F

Ribos_L4_asso_C domain-containing protein

Chain a

KOW domain-containing protein

Chain g

60S ribosomal protein eL32