IL_7QIZ_067
3D structure
- PDB id
- 7QIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- GAAA*UCAUAA(OMC)CG(OMC)AUCA(OMG)GUC
- Length
- 22 nucleotides
- Bulged bases
- 7QIZ|1|2|U|1846, 7QIZ|1|2|A|1856
- QA status
- Modified nucleotides: OMC, OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QIZ|1|2|G|1499
7QIZ|1|2|A|1500
7QIZ|1|2|A|1501
7QIZ|1|2|A|1502
*
7QIZ|1|2|U|1843
7QIZ|1|2|C|1844
7QIZ|1|2|A|1845
7QIZ|1|2|U|1846
7QIZ|1|2|A|1847
7QIZ|1|2|A|1848
7QIZ|1|2|OMC|1849
7QIZ|1|2|C|1850
7QIZ|1|2|G|1851
7QIZ|1|2|OMC|1852
7QIZ|1|2|A|1853
7QIZ|1|2|U|1854
7QIZ|1|2|C|1855
7QIZ|1|2|A|1856
7QIZ|1|2|OMG|1857
7QIZ|1|2|G|1858
7QIZ|1|2|U|1859
7QIZ|1|2|C|1860
Current chains
- Chain 2
- 25S rRNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain F
- Ribos_L4_asso_C domain-containing protein
- Chain R
- 50S ribosomal protein L22, chloroplastic
- Chain i
- 60S ribosomal protein eL34
- Chain l
- Ribosomal protein L37
- Chain n
- 60S ribosomal protein eL39
Coloring options: