IL_7QIZ_116
3D structure
- PDB id
- 7QIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- AAGCGGGUUUUUGGACCCAAG*CGAU
- Length
- 25 nucleotides
- Bulged bases
- 7QIZ|1|2|U|2553, 7QIZ|1|2|U|2554, 7QIZ|1|2|U|2555, 7QIZ|1|2|U|2556, 7QIZ|1|2|U|2557, 7QIZ|1|2|G|2558
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QIZ|1|2|A|2534
7QIZ|1|2|A|2535
7QIZ|1|2|G|2536
7QIZ|1|2|C|2537
7QIZ|1|2|G|2538
7QIZ|1|2|G|2539
7QIZ|1|2|G|2540
7QIZ|1|2|U|2553
7QIZ|1|2|U|2554
7QIZ|1|2|U|2555
7QIZ|1|2|U|2556
7QIZ|1|2|U|2557
7QIZ|1|2|G|2558
7QIZ|1|2|G|2559
7QIZ|1|2|A|2560
7QIZ|1|2|C|2561
7QIZ|1|2|C|2562
7QIZ|1|2|C|2563
7QIZ|1|2|A|2564
7QIZ|1|2|A|2565
7QIZ|1|2|G|2566
*
7QIZ|1|2|C|2582
7QIZ|1|2|G|2583
7QIZ|1|2|A|2584
7QIZ|1|2|U|2585
Current chains
- Chain 2
- 25S rRNA
Nearby chains
- Chain D
- 60S ribosomal protein L8
- Chain J
- Ribosomal_L7Ae domain-containing protein
- Chain b
- 60S ribosomal protein L27
- Chain e
- 60S ribosomal protein eL30
- Chain i
- 60S ribosomal protein eL34
- Chain q
- 60S ribosomal protein eL43
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