IL_7QIZ_125

3D structure

PDB id

7QIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Specific features and methylation sites of a plant 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

GGC(PSU)UG*UGA(PSU)CC

Length

12 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QIZ|1|2|G|2827
7QIZ|1|2|G|2828
7QIZ|1|2|C|2829
7QIZ|1|2|PSU|2830
7QIZ|1|2|U|2831
7QIZ|1|2|G|2832
*
7QIZ|1|2|U|2866
7QIZ|1|2|G|2867
7QIZ|1|2|A|2868
7QIZ|1|2|PSU|2869
7QIZ|1|2|C|2870
7QIZ|1|2|C|2871

Current chains

Chain 2

25S rRNA

Nearby chains

Chain L

60S ribosomal protein L10