IL_7QIZ_149

3D structure

PDB id

7QIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Specific features and methylation sites of a plant 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

CCGCAGUAG*CCAAGG

Length

15 nucleotides

Bulged bases

7QIZ|1|2|C|3179, 7QIZ|1|2|A|3185

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QIZ|1|2|C|3178
7QIZ|1|2|C|3179
7QIZ|1|2|G|3180
7QIZ|1|2|C|3181
7QIZ|1|2|A|3182
7QIZ|1|2|G|3183
7QIZ|1|2|U|3184
7QIZ|1|2|A|3185
7QIZ|1|2|G|3186
*
7QIZ|1|2|C|3200
7QIZ|1|2|C|3201
7QIZ|1|2|A|3202
7QIZ|1|2|A|3203
7QIZ|1|2|G|3204
7QIZ|1|2|G|3205

Current chains

Chain 2

25S rRNA

Nearby chains

Chain H

Ribosomal_L6e_N domain-containing protein

Chain K

60S ribosomal protein uL6

Chain O

Ribosomal_L14e domain-containing protein

Chain Q

Pectinesterase

Chain U

60S ribosomal protein L18a