IL_7QIZ_158
3D structure
- PDB id
- 7QIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- CUAACGCA*UUAAGCG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QIZ_158 not in the Motif Atlas
- Homologous match to IL_4WF9_113
- Geometric discrepancy: 0.583
- The information below is about IL_4WF9_113
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_19048.1
- Basepair signature
- cWW-L-R-L-R-L-cSH-L-R-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
7QIZ|1|5|C|20
7QIZ|1|5|U|21
7QIZ|1|5|A|22
7QIZ|1|5|A|23
7QIZ|1|5|C|24
7QIZ|1|5|G|25
7QIZ|1|5|C|26
7QIZ|1|5|A|27
*
7QIZ|1|5|U|52
7QIZ|1|5|U|53
7QIZ|1|5|A|54
7QIZ|1|5|A|55
7QIZ|1|5|G|56
7QIZ|1|5|C|57
7QIZ|1|5|G|58
Current chains
- Chain 5
- 5S rRNA
Nearby chains
- Chain G
- Ribosomal_L18_c domain-containing protein
- Chain M
- 60S ribosomal protein uL5
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