IL_7QIZ_189
3D structure
- PDB id
- 7QIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- UUUCGA*UG
- Length
- 8 nucleotides
- Bulged bases
- 7QIZ|1|S2|U|324, 7QIZ|1|S2|C|325
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QIZ_189 not in the Motif Atlas
- Geometric match to IL_5Y58_001
- Geometric discrepancy: 0.2686
- The information below is about IL_5Y58_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37738.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7QIZ|1|S2|U|322
7QIZ|1|S2|U|323
7QIZ|1|S2|U|324
7QIZ|1|S2|C|325
7QIZ|1|S2|G|326
7QIZ|1|S2|A|327
*
7QIZ|1|S2|U|349
7QIZ|1|S2|G|350
Current chains
- Chain S2
- 18S
Nearby chains
- Chain 2
- Large subunit ribosomal RNA; LSU rRNA
- Chain T
- Ribosomal protein L19
- Chain y
- 40S ribosomal protein S8
- Chain z
- Ribosomal_S17_N domain-containing protein
Coloring options: