IL_7QIZ_234

3D structure

PDB id

7QIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Specific features and methylation sites of a plant 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

GU(PSU)GG*CGA(A2M)C

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QIZ|1|S2|G|1291
7QIZ|1|S2|U|1292
7QIZ|1|S2|PSU|1293
7QIZ|1|S2|G|1294
7QIZ|1|S2|G|1295
*
7QIZ|1|S2|C|1326
7QIZ|1|S2|G|1327
7QIZ|1|S2|A|1328
7QIZ|1|S2|A2M|1329
7QIZ|1|S2|C|1330

Current chains

Chain S2

18S

Nearby chains

Chain AA

40S ribosomal protein S17

Chain EA

S5 DRBM domain-containing protein

Chain NA

KH type-2 domain-containing protein

Chain u

40S ribosomal protein SA