IL_7QIZ_238

3D structure

PDB id

7QIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Specific features and methylation sites of a plant 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

CUAUG*CGGCCAG

Length

12 nucleotides

Bulged bases

7QIZ|1|S2|C|1377, 7QIZ|1|S2|C|1378

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QIZ|1|S2|C|1353
7QIZ|1|S2|U|1354
7QIZ|1|S2|A|1355
7QIZ|1|S2|U|1356
7QIZ|1|S2|G|1357
*
7QIZ|1|S2|C|1374
7QIZ|1|S2|G|1375
7QIZ|1|S2|G|1376
7QIZ|1|S2|C|1377
7QIZ|1|S2|C|1378
7QIZ|1|S2|A|1379
7QIZ|1|S2|G|1380

Current chains

Chain S2

18S

Nearby chains

Chain RA

40S ribosomal protein uS9

Chain UA

40S ribosomal protein eS19

Chain VA

Ribosomal_S10 domain-containing protein