IL_7QIZ_290
3D structure
- PDB id
- 7QIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- AC*GGA(PSU)
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QIZ_290 not in the Motif Atlas
- Homologous match to IL_8P9A_412
- Geometric discrepancy: 0.3607
- The information below is about IL_8P9A_412
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73108.2
- Basepair signature
- cWW-cWS-cSH-cWW
- Number of instances in this motif group
- 23
Unit IDs
7QIZ|1|S2|A|750
7QIZ|1|S2|C|751
*
7QIZ|1|S2|G|806
7QIZ|1|S2|G|807
7QIZ|1|S2|A|808
7QIZ|1|S2|PSU|809
Current chains
- Chain S2
- 18S
Nearby chains
- Chain CA
- 40S body ribosomal protein uS12
- Chain JA
- 40S ribosomal protein S15a-1
- Chain x
- 40S ribosomal protein S7
- Chain z
- Ribosomal_S17_N domain-containing protein
Coloring options: