IL_7QIZ_300
3D structure
- PDB id
- 7QIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- CUAU*GGCCAG
- Length
- 10 nucleotides
- Bulged bases
- 7QIZ|1|S2|C|1377, 7QIZ|1|S2|C|1378
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QIZ_300 not in the Motif Atlas
- Homologous match to IL_8P9A_446
- Geometric discrepancy: 0.5782
- The information below is about IL_8P9A_446
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QIZ|1|S2|C|1353
7QIZ|1|S2|U|1354
7QIZ|1|S2|A|1355
7QIZ|1|S2|U|1356
*
7QIZ|1|S2|G|1375
7QIZ|1|S2|G|1376
7QIZ|1|S2|C|1377
7QIZ|1|S2|C|1378
7QIZ|1|S2|A|1379
7QIZ|1|S2|G|1380
Current chains
- Chain S2
- 18S
Nearby chains
- Chain RA
- 40S ribosomal protein uS9
- Chain UA
- 40S ribosomal protein eS19
- Chain VA
- Ribosomal_S10 domain-containing protein
Coloring options: