IL_7QIZ_301
3D structure
- PDB id
- 7QIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- A(PSU)UCAACGA*UUUGAAAUU
- Length
- 18 nucleotides
- Bulged bases
- 7QIZ|1|S2|U|1528
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QIZ|1|S2|A|1484
7QIZ|1|S2|PSU|1485
7QIZ|1|S2|U|1486
7QIZ|1|S2|C|1487
7QIZ|1|S2|A|1488
7QIZ|1|S2|A|1489
7QIZ|1|S2|C|1490
7QIZ|1|S2|G|1491
7QIZ|1|S2|A|1492
*
7QIZ|1|S2|U|1526
7QIZ|1|S2|U|1527
7QIZ|1|S2|U|1528
7QIZ|1|S2|G|1529
7QIZ|1|S2|A|1530
7QIZ|1|S2|A|1531
7QIZ|1|S2|A|1532
7QIZ|1|S2|U|1533
7QIZ|1|S2|U|1534
Current chains
- Chain S2
- 18S
Nearby chains
- Chain NA
- KH type-2 domain-containing protein
- Chain OA
- Ribosomal_S7 domain-containing protein
- Chain RA
- 40S ribosomal protein uS9
- Chain UA
- 40S ribosomal protein eS19
- Chain VA
- Ribosomal_S10 domain-containing protein
- Chain XA
- 40S ribosomal protein uS14
- Chain ZA
- 40S ribosomal protein S25
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