IL_7QP6_027
3D structure
- PDB id
- 7QP6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 48S initiation complex in open state (h48S AUG open)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CCCACUC*GGA(OMG)G
- Length
- 12 nucleotides
- Bulged bases
- 7QP6|1|A|G|507
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QP6_027 not in the Motif Atlas
- Geometric match to IL_4LFB_048
- Geometric discrepancy: 0.3708
- The information below is about IL_4LFB_048
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_89862.1
- Basepair signature
- cWW-L-tHS-L-R-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
7QP6|1|A|C|490
7QP6|1|A|C|491
7QP6|1|A|C|492
7QP6|1|A|A|493
7QP6|1|A|C|494
7QP6|1|A|U|495
7QP6|1|A|C|496
*
7QP6|1|A|G|506
7QP6|1|A|G|507
7QP6|1|A|A|508
7QP6|1|A|OMG|509
7QP6|1|A|G|510
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain C
- 40S ribosomal protein S4, X isoform
- Chain D
- 40S ribosomal protein S9
- Chain T
- 40S ribosomal protein S24
Coloring options: