IL_7QP6_077
3D structure
- PDB id
- 7QP6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 48S initiation complex in open state (h48S AUG open)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- ACU*AUU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QP6_077 not in the Motif Atlas
- Geometric match to IL_5TBW_115
- Geometric discrepancy: 0.1333
- The information below is about IL_5TBW_115
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
7QP6|1|A|A|1537
7QP6|1|A|C|1538
7QP6|1|A|U|1539
*
7QP6|1|A|A|1594
7QP6|1|A|U|1595
7QP6|1|A|U|1596
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain V
- 40S ribosomal protein S5
- Chain Y
- 40S ribosomal protein S16
- Chain d
- 40S ribosomal protein S19
- Chain e
- 40S ribosomal protein S25
- Chain f
- 40S ribosomal protein S18
Coloring options: