IL_7QP6_086
3D structure
- PDB id
- 7QP6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 48S initiation complex in open state (h48S AUG open)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CGAU*AGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QP6_086 not in the Motif Atlas
- Geometric match to IL_4KZD_002
- Geometric discrepancy: 0.1332
- The information below is about IL_4KZD_002
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.2
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 43
Unit IDs
7QP6|1|A|C|1717
7QP6|1|A|G|1718
7QP6|1|A|A|1719
7QP6|1|A|U|1720
*
7QP6|1|A|A|1813
7QP6|1|A|G|1814
7QP6|1|A|A|1815
7QP6|1|A|G|1816
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain 9
- 60S ribosomal protein L41
- Chain E
- 40S ribosomal protein S23
Coloring options: