IL_7QP7_100
3D structure
- PDB id
- 7QP7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 48S initiation complex in closed state (h48S AUG closed)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GGCC*GAAU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QP7_100 not in the Motif Atlas
- Homologous match to IL_8P9A_419
- Geometric discrepancy: 0.0946
- The information below is about IL_8P9A_419
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 39
Unit IDs
7QP7|1|A|G|928
7QP7|1|A|G|929
7QP7|1|A|C|930
7QP7|1|A|C|931
*
7QP7|1|A|G|1010
7QP7|1|A|A|1011
7QP7|1|A|A|1012
7QP7|1|A|U|1013
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain H
- 40S ribosomal protein S27
- Chain I
- 40S ribosomal protein S13
- Chain O
- 40S ribosomal protein S3a
- Chain y
- Eukaryotic translation initiation factor 3 subunit C
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