3D structure

PDB id
7QQ3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.
Experimental method
ELECTRON MICROSCOPY
Resolution
2.1 Å

Loop

Sequence
GUUG*CAUC
Length
8 nucleotides
Bulged bases
7QQ3|1|I|U|1061
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7QQ3_041 not in the Motif Atlas
Homologous match to IL_5J7L_285
Geometric discrepancy: 0.3189
The information below is about IL_5J7L_285
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_92446.2
Basepair signature
cWW-cWW-R-L-L
Number of instances in this motif group
5

Unit IDs

7QQ3|1|I|G|1059
7QQ3|1|I|U|1060
7QQ3|1|I|U|1061
7QQ3|1|I|G|1062
*
7QQ3|1|I|C|1076
7QQ3|1|I|A|1077
7QQ3|1|I|U|1078
7QQ3|1|I|C|1079

Current chains

Chain I
23S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:


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