IL_7QQ3_045
3D structure
- PDB id
- 7QQ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.1 Å
Loop
- Sequence
- CUGCGAAG*UGGAG
- Length
- 13 nucleotides
- Bulged bases
- 7QQ3|1|I|C|1211
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QQ3_045 not in the Motif Atlas
- Homologous match to IL_5J7L_288
- Geometric discrepancy: 0.0711
- The information below is about IL_5J7L_288
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_70923.9
- Basepair signature
- cWW-tSS-tSH-L-tHS-tHS-cWW
- Number of instances in this motif group
- 27
Unit IDs
7QQ3|1|I|C|1208
7QQ3|1|I|U|1209
7QQ3|1|I|G|1210
7QQ3|1|I|C|1211
7QQ3|1|I|G|1212
7QQ3|1|I|A|1213
7QQ3|1|I|A|1214
7QQ3|1|I|G|1215
*
7QQ3|1|I|U|1234
7QQ3|1|I|G|1235
7QQ3|1|I|G|1236
7QQ3|1|I|A|1237
7QQ3|1|I|G|1238
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain Y
- 50S ribosomal protein L20
Coloring options: