IL_7QQ3_089

3D structure

PDB id

7QQ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

CUUUGAAG*UGGAG

Length

13 nucleotides

Bulged bases

7QQ3|1|I|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QQ3_089 not in the Motif Atlas

Homologous match to IL_7RQB_087

Geometric discrepancy: 0.5164

The information below is about IL_7RQB_087

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QQ3|1|I|C|2129
7QQ3|1|I|U|2130
7QQ3|1|I|U|2131
7QQ3|1|I|U|2132
7QQ3|1|I|G|2133
7QQ3|1|I|A|2134
7QQ3|1|I|A|2135
7QQ3|1|I|G|2136
*
7QQ3|1|I|U|2155
7QQ3|1|I|G|2156
7QQ3|1|I|G|2157
7QQ3|1|I|A|2158
7QQ3|1|I|G|2159

Current chains

Chain I

23S ribosomal RNA

Nearby chains