IL_7QV1_051

3D structure

PDB id

7QV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis collided disome (Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUGUGAAG*UGGAG

Length

13 nucleotides

Bulged bases

7QV1|1|V|U|1251

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QV1_051 not in the Motif Atlas

Homologous match to IL_7RQB_047

Geometric discrepancy: 0.1852

The information below is about IL_7RQB_047

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_70923.2

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

28

Unit IDs

7QV1|1|V|C|1248
7QV1|1|V|U|1249
7QV1|1|V|G|1250
7QV1|1|V|U|1251
7QV1|1|V|G|1252
7QV1|1|V|A|1253
7QV1|1|V|A|1254
7QV1|1|V|G|1255
*
7QV1|1|V|U|1274
7QV1|1|V|G|1275
7QV1|1|V|G|1276
7QV1|1|V|A|1277
7QV1|1|V|G|1278

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain Q

50S ribosomal protein L20