IL_7QV1_109

3D structure

PDB id

7QV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis collided disome (Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UUGAG*CAAGAUGAG

Length

14 nucleotides

Bulged bases

7QV1|1|V|G|2809

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QV1_109 not in the Motif Atlas

Homologous match to IL_7RQB_102

Geometric discrepancy: 0.1451

The information below is about IL_7RQB_102

Detailed Annotation

tSH-tHS-tHW

Broad Annotation

tSH-tHS-tHW

Motif group

IL_04638.1

Basepair signature

cWW-tSH-tHW-tHS-cSH-cWW-L

Number of instances in this motif group

5

Unit IDs

7QV1|1|V|U|2665
7QV1|1|V|U|2666
7QV1|1|V|G|2667
7QV1|1|V|A|2668
7QV1|1|V|G|2669
*
7QV1|1|V|C|2803
7QV1|1|V|A|2804
7QV1|1|V|A|2805
7QV1|1|V|G|2806
7QV1|1|V|A|2807
7QV1|1|V|U|2808
7QV1|1|V|G|2809
7QV1|1|V|A|2810
7QV1|1|V|G|2811

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L13