IL_7QV1_117

3D structure

PDB id

7QV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis collided disome (Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGGAAG*UGGAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QV1_117 not in the Motif Atlas

Homologous match to IL_4WF9_108

Geometric discrepancy: 0.1583

The information below is about IL_4WF9_108

Detailed Annotation

tHS double platform

Broad Annotation

No text annotation

Motif group

IL_48489.1

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

8

Unit IDs

7QV1|1|V|U|2872
7QV1|1|V|G|2873
7QV1|1|V|G|2874
7QV1|1|V|A|2875
7QV1|1|V|A|2876
7QV1|1|V|G|2877
*
7QV1|1|V|U|2890
7QV1|1|V|G|2891
7QV1|1|V|G|2892
7QV1|1|V|A|2893
7QV1|1|V|G|2894

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain N

50S ribosomal protein L17

Chain P

50S ribosomal protein L19