3D structure

PDB id
7QV3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)
Experimental method
ELECTRON MICROSCOPY
Resolution
5.14 Å

Loop

Sequence
CUGAGUAG*CGAAACG
Length
15 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7QV3_014 not in the Motif Atlas
Homologous match to IL_4WF9_009
Geometric discrepancy: 0.1291
The information below is about IL_4WF9_009
Detailed Annotation
8x7 Sarcin-Ricin; G-bulge
Broad Annotation
Sarcin-Ricin; G-bulge
Motif group
IL_62167.3
Basepair signature
cWW-cWW-tSH-cSH-R-tWH-tHS-cWW
Number of instances in this motif group
20

Unit IDs

7QV3|1|V|C|241
7QV3|1|V|U|242
7QV3|1|V|G|243
7QV3|1|V|A|244
7QV3|1|V|G|245
7QV3|1|V|U|246
7QV3|1|V|A|247
7QV3|1|V|G|248
*
7QV3|1|V|C|256
7QV3|1|V|G|257
7QV3|1|V|A|258
7QV3|1|V|A|259
7QV3|1|V|A|260
7QV3|1|V|C|261
7QV3|1|V|G|262

Current chains

Chain V
23S ribosomal RNA

Nearby chains

Chain 3
50S ribosomal protein L35
Chain L
50S ribosomal protein L15

Coloring options:


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