IL_7QV3_020

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

CCU*AUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QV3_020 not in the Motif Atlas

Geometric match to IL_5VCI_002

Geometric discrepancy: 0.1305

The information below is about IL_5VCI_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.4

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

215

Unit IDs

7QV3|1|V|C|608
7QV3|1|V|C|609
7QV3|1|V|U|610
*
7QV3|1|V|A|619
7QV3|1|V|U|620
7QV3|1|V|G|621

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain L

50S ribosomal protein L15

Chain Q

50S ribosomal protein L20

Chain R

50S ribosomal protein L21