IL_7QV3_103

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

AUC*GGUUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QV3_103 not in the Motif Atlas

Homologous match to IL_7RQB_094

Geometric discrepancy: 0.1779

The information below is about IL_7RQB_094

Detailed Annotation

Major groove minor groove platform with extra cWW

Broad Annotation

Major groove minor groove platform; mini C-loop

Motif group

IL_92788.2

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

14

Unit IDs

7QV3|1|V|A|2488
7QV3|1|V|U|2489
7QV3|1|V|C|2490
*
7QV3|1|V|G|2518
7QV3|1|V|G|2519
7QV3|1|V|U|2520
7QV3|1|V|U|2521
7QV3|1|V|U|2522

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain M

50S ribosomal protein L16

Chain W

50S ribosomal protein L27