IL_7QV3_106

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

CUC*GCGAG

Length

8 nucleotides

Bulged bases

7QV3|1|V|G|2605, 7QV3|1|V|A|2606

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QV3_106 not in the Motif Atlas

Geometric match to IL_4WF9_095

Geometric discrepancy: 0.1576

The information below is about IL_4WF9_095

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_68118.4

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

31

Unit IDs

7QV3|1|V|C|2539
7QV3|1|V|U|2540
7QV3|1|V|C|2541
*
7QV3|1|V|G|2603
7QV3|1|V|C|2604
7QV3|1|V|G|2605
7QV3|1|V|A|2606
7QV3|1|V|G|2607

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3