IL_7QV3_115

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

GAUAAG*UGAAGC

Length

12 nucleotides

Bulged bases

7QV3|1|V|A|2794

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QV3_115 not in the Motif Atlas

Homologous match to IL_7RQB_107

Geometric discrepancy: 0.1678

The information below is about IL_7RQB_107

Detailed Annotation

UAA/GAN with extra cWW

Broad Annotation

No text annotation

Motif group

IL_49767.5

Basepair signature

cWW-cWW-tWH-L-tHS-cWW

Number of instances in this motif group

5

Unit IDs

7QV3|1|V|G|2766
7QV3|1|V|A|2767
7QV3|1|V|U|2768
7QV3|1|V|A|2769
7QV3|1|V|A|2770
7QV3|1|V|G|2771
*
7QV3|1|V|U|2791
7QV3|1|V|G|2792
7QV3|1|V|A|2793
7QV3|1|V|A|2794
7QV3|1|V|G|2795
7QV3|1|V|C|2796

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain 4

50S ribosomal protein L36

Chain G

50S ribosomal protein L6

Chain J

50S ribosomal protein L13