IL_7QVP_034

3D structure

PDB id

7QVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human collided disome (di-ribosome) stalled on XBP1 mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GCCCGGC*GUCC

Length

11 nucleotides

Bulged bases

7QVP|1|L5|C|502, 7QVP|1|L5|C|503

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QVP|1|L5|G|500
7QVP|1|L5|C|501
7QVP|1|L5|C|502
7QVP|1|L5|C|503
7QVP|1|L5|G|504
7QVP|1|L5|G|505
7QVP|1|L5|C|506
*
7QVP|1|L5|G|652
7QVP|1|L5|U|653
7QVP|1|L5|C|654
7QVP|1|L5|C|655

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LQ

60S ribosomal protein L18

Chain La

60S ribosomal protein L27a