IL_7QVP_069
3D structure
- PDB id
- 7QVP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human collided disome (di-ribosome) stalled on XBP1 mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUCGCAGACCCGACCGCCACG*CG
- Length
- 23 nucleotides
- Bulged bases
- 7QVP|1|L5|C|1707
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QVP_069 not in the Motif Atlas
- Homologous match to IL_8P9A_264
- Geometric discrepancy: 0.5592
- The information below is about IL_8P9A_264
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_25463.2
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
7QVP|1|L5|C|1694
7QVP|1|L5|U|1695
7QVP|1|L5|C|1696
7QVP|1|L5|G|1697
7QVP|1|L5|C|1698
7QVP|1|L5|A|1699
7QVP|1|L5|G|1700
7QVP|1|L5|A|1701
7QVP|1|L5|C|1702
7QVP|1|L5|C|1703
7QVP|1|L5|C|1704
7QVP|1|L5|G|1705
7QVP|1|L5|A|1706
7QVP|1|L5|C|1707
7QVP|1|L5|C|1715
7QVP|1|L5|G|1716
7QVP|1|L5|C|1717
7QVP|1|L5|C|1718
7QVP|1|L5|A|1719
7QVP|1|L5|C|1720
7QVP|1|L5|G|1721
*
7QVP|1|L5|C|1841
7QVP|1|L5|G|1842
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain LC
- 60S ribosomal protein L4
- Chain LF
- 60S ribosomal protein L7
- Chain LQ
- 60S ribosomal protein L18
- Chain LT
- 60S ribosomal protein L21
Coloring options: