IL_7QVP_152

3D structure

PDB id

7QVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human collided disome (di-ribosome) stalled on XBP1 mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

ACAUUUG*UACCAU

Length

13 nucleotides

Bulged bases

7QVP|1|L5|C|4670

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QVP|1|L5|A|4624
7QVP|1|L5|C|4625
7QVP|1|L5|A|4626
7QVP|1|L5|U|4627
7QVP|1|L5|U|4628
7QVP|1|L5|U|4629
7QVP|1|L5|G|4630
*
7QVP|1|L5|U|4668
7QVP|1|L5|A|4669
7QVP|1|L5|C|4670
7QVP|1|L5|C|4671
7QVP|1|L5|A|4672
7QVP|1|L5|U|4673

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LV

60S ribosomal protein L23

Chain LW

60S ribosomal protein L24