IL_7QVP_185

3D structure

PDB id

7QVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human collided disome (di-ribosome) stalled on XBP1 mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGUC*GCUAC

Length

9 nucleotides

Bulged bases

7QVP|1|L6|C|1301

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QVP|1|L6|G|443
7QVP|1|L6|G|444
7QVP|1|L6|U|445
7QVP|1|L6|C|446
*
7QVP|1|L6|G|1300
7QVP|1|L6|C|1301
7QVP|1|L6|U|1302
7QVP|1|L6|A|1303
7QVP|1|L6|C|1304

Current chains

Chain L6

28S ribosomal RNA

Nearby chains

Chain L1

5.8S ribosomal RNA; 5.8S rRNA

Chain Me

60S ribosomal protein L32

Chain Mf

60S ribosomal protein L35a