IL_7QVP_199

3D structure

PDB id

7QVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human collided disome (di-ribosome) stalled on XBP1 mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AAGG*CAGCAGCACU

Length

14 nucleotides

Bulged bases

7QVP|1|L6|A|932, 7QVP|1|L6|C|934, 7QVP|1|L6|A|935, 7QVP|1|L6|C|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QVP|1|L6|A|732
7QVP|1|L6|A|733
7QVP|1|L6|G|734
7QVP|1|L6|G|735
*
7QVP|1|L6|C|928
7QVP|1|L6|A|929
7QVP|1|L6|G|930
7QVP|1|L6|C|931
7QVP|1|L6|A|932
7QVP|1|L6|G|933
7QVP|1|L6|C|934
7QVP|1|L6|A|935
7QVP|1|L6|C|936
7QVP|1|L6|U|937

Current chains

Chain L6

28S ribosomal RNA

Nearby chains

Chain MC

60S ribosomal protein L4

Chain MM

60S ribosomal protein L14

Chain MS

60S ribosomal protein L18a