IL_7QVP_323

3D structure

PDB id

7QVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human collided disome (di-ribosome) stalled on XBP1 mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAAACG*CUCGC

Length

11 nucleotides

Bulged bases

7QVP|1|L6|A|4894, 7QVP|1|L6|C|4895

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QVP|1|L6|G|4891
7QVP|1|L6|A|4892
7QVP|1|L6|A|4893
7QVP|1|L6|A|4894
7QVP|1|L6|C|4895
7QVP|1|L6|G|4896
*
7QVP|1|L6|C|4924
7QVP|1|L6|U|4925
7QVP|1|L6|C|4926
7QVP|1|L6|G|4927
7QVP|1|L6|C|4928

Current chains

Chain L6

28S ribosomal RNA

Nearby chains

Chain MM

60S ribosomal protein L14

Chain MO

60S ribosomal protein L13a