IL_7QVP_329

3D structure

PDB id

7QVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human collided disome (di-ribosome) stalled on XBP1 mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UCGUACG*UUGAAA

Length

13 nucleotides

Bulged bases

7QVP|1|L6|G|5041

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QVP|1|L6|U|5003
7QVP|1|L6|C|5004
7QVP|1|L6|G|5005
7QVP|1|L6|U|5006
7QVP|1|L6|A|5007
7QVP|1|L6|C|5008
7QVP|1|L6|G|5009
*
7QVP|1|L6|U|5039
7QVP|1|L6|U|5040
7QVP|1|L6|G|5041
7QVP|1|L6|A|5042
7QVP|1|L6|A|5043
7QVP|1|L6|A|5044

Current chains

Chain L6

28S ribosomal RNA

Nearby chains

Chain MB

60S ribosomal protein L3

Chain MW

60S ribosomal protein L24

Chain Md

60S ribosomal protein L31