IL_7QVP_383

3D structure

PDB id

7QVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human collided disome (di-ribosome) stalled on XBP1 mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

ACUU*AGGAAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QVP|1|S2|A|802
7QVP|1|S2|C|803
7QVP|1|S2|U|804
7QVP|1|S2|U|805
*
7QVP|1|S2|A|858
7QVP|1|S2|G|859
7QVP|1|S2|G|860
7QVP|1|S2|A|861
7QVP|1|S2|A|862
7QVP|1|S2|U|863

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SE

40S ribosomal protein S4, X isoform

Chain SH

40S ribosomal protein S7

Chain SL

40S ribosomal protein S11

Chain SW

40S ribosomal protein S15a

Chain SX

40S ribosomal protein S23