IL_7QVP_443
3D structure
- PDB id
- 7QVP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human collided disome (di-ribosome) stalled on XBP1 mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UCUAAG*CUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QVP_443 not in the Motif Atlas
- Geometric match to IL_4V88_389
- Geometric discrepancy: 0.2156
- The information below is about IL_4V88_389
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61299.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
7QVP|1|S3|U|57
7QVP|1|S3|C|58
7QVP|1|S3|U|59
7QVP|1|S3|A|60
7QVP|1|S3|A|61
7QVP|1|S3|G|62
*
7QVP|1|S3|C|86
7QVP|1|S3|U|87
7QVP|1|S3|G|88
Current chains
- Chain S3
- 18S ribosomal RNA
Nearby chains
- Chain RE
- 40S ribosomal protein S4, X isoform
- Chain RG
- 40S ribosomal protein S6
- Chain RY
- 40S ribosomal protein S24
Coloring options: