IL_7QVP_449

3D structure

PDB id

7QVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human collided disome (di-ribosome) stalled on XBP1 mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GACUU*AUGCCGAC

Length

13 nucleotides

Bulged bases

7QVP|1|S3|C|142, 7QVP|1|S3|U|143

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QVP|1|S3|G|130
7QVP|1|S3|A|141
7QVP|1|S3|C|142
7QVP|1|S3|U|143
7QVP|1|S3|U|144
*
7QVP|1|S3|A|175
7QVP|1|S3|U|176
7QVP|1|S3|G|177
7QVP|1|S3|C|178
7QVP|1|S3|C|179
7QVP|1|S3|G|180
7QVP|1|S3|A|181
7QVP|1|S3|C|182

Current chains

Chain S3

18S ribosomal RNA

Nearby chains

Chain RG

40S ribosomal protein S6